MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Staphylococcus saprophyticus
19428wB1_WM06
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 40
bases: 2,926,943 bps
CDS: 2,726
rRNA: 9
Repeat region:
tmRNA: 1
tRNA: 59
misc RNA:
Total features: 2,795
Total number of protein coding genes annotated/found:
2,726
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Items 21 - 40
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Molecule
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5041|JADGLJ010000010.1
SEQF5041_00021
Genome Viewer
NA
AA
678/226
18671-19348
3-oxoacyl-[acyl-carrier-protein] reductase FabG
SEQF5041|JADGLJ010000010.1
SEQF5041_00022
Genome Viewer
NA
AA
1605/535
21310-19706
N-substituted formamide deformylase
SEQF5041|JADGLJ010000010.1
SEQF5041_00023
Genome Viewer
NA
AA
444/148
21983-21540
hypothetical protein
SEQF5041|JADGLJ010000010.1
SEQF5041_00024
Genome Viewer
NA
AA
444/148
22133-22576
Spermine/spermidine acetyltransferase
SEQF5041|JADGLJ010000010.1
SEQF5041_00025
Genome Viewer
NA
AA
735/245
22645-23379
Cyclopentanol dehydrogenase
SEQF5041|JADGLJ010000010.1
SEQF5041_00026
Genome Viewer
NA
AA
1335/445
25210-23876
Hydroxyacylglutathione hydrolase
SEQF5041|JADGLJ010000010.1
SEQF5041_00027
Genome Viewer
NA
AA
1068/356
26311-25244
Thiosulfate sulfurtransferase GlpE
SEQF5041|JADGLJ010000010.1
SEQF5041_00028
Genome Viewer
NA
AA
261/87
26450-26710
Copper-sensing transcriptional repressor RicR
SEQF5041|JADGLJ010000010.1
SEQF5041_00029
Genome Viewer
NA
AA
756/252
26710-27465
hypothetical protein
SEQF5041|JADGLJ010000010.1
SEQF5041_00030
Genome Viewer
NA
AA
609/203
27490-28098
hypothetical protein
SEQF5041|JADGLJ010000010.1
SEQF5041_00031
Genome Viewer
NA
AA
285/95
28554-28270
putative HTH-type transcriptional regulator YdjF
SEQF5041|JADGLJ010000010.1
SEQF5041_00032
Genome Viewer
NA
AA
411/137
29417-29007
hypothetical protein
SEQF5041|JADGLJ010000010.1
SEQF5041_00033
Genome Viewer
NA
AA
96/32
29800-29895
hypothetical protein
SEQF5041|JADGLJ010000010.1
SEQF5041_00034
Genome Viewer
NA
AA
315/105
30250-30564
Transcriptional repressor SdpR
SEQF5041|JADGLJ010000010.1
SEQF5041_00035
Genome Viewer
NA
AA
1290/430
30564-31853
Arsenical pump membrane protein
SEQF5041|JADGLJ010000010.1
SEQF5041_00036
Genome Viewer
NA
AA
402/134
31871-32272
Arsenate reductase
SEQF5041|JADGLJ010000010.1
SEQF5041_00037
Genome Viewer
NA
AA
543/181
32844-32302
hypothetical protein
SEQF5041|JADGLJ010000010.1
SEQF5041_00038
Genome Viewer
NA
AA
1452/484
32958-34409
C4-dicarboxylic acid transporter DauA
SEQF5041|JADGLJ010000010.1
SEQF5041_00039
Genome Viewer
NA
AA
414/138
34421-34834
hypothetical protein
SEQF5041|JADGLJ010000010.1
SEQF5041_00040
Genome Viewer
NA
AA
891/297
36045-35155
HTH-type transcriptional regulator BenM
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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